Preprints

  • C. M. Livi, I. Tagliaferri, K. Pal, E. Sebestyén, F. Lucini, A. Bianchi, S. Valsoni, C. Lanzuolo, F. Ferrari (2020) A ChIC solution for ChIP-seq quality assessment. bioRxiv, doi:10.1101/2020.05.19.103887

  • E. Kerschbamer, T. Tripathi, S. Erdin, E. Salviato, F. Di Leva, E. Sebestyén, M. Arnoldi, M. Benelli, J. F. Gusella, S. Piazza, F. Demichelis, M. E. Talkowski, F. Ferrari, M. Biagioli (2020) CHD8 Suppression Impacts on Histone H3 Lysine Trimethylation and Alters RNA Alternative Splicing. bioRxiv, doi:10.1101/2020.03.14.992032

  • E. Sebestyén, F. Marullo, F. Lucini, A. Bianchi, C. Petrini, S. Valsoni, I. Olivieri, L. Antonelli, F. Gregoretti, G. Oliva, F. Ferrari, C. Lanzuolo (2019) Early Polycomb-target deregulation in Hutchinson-Gilford Progeria Syndrome revealed by heterochromatin analysis. bioRxiv, doi:10.1101/799668

Papers

  • A. Szücs, S. Paku, E. Sebestyén, P. Nagy, K. Dezső (2020) Postnatal, ontogenic liver growth accomplished by biliary/oval cell proliferation and differentiation. PLOS ONE, 15(5): e0233736, doi:10.1371/journal.pone.0233736

  • S. Atashpaz, S. S. Shams, J. M. Gonzalez, E. Sebestyén, N. Arghavanifard, A. Gnocchi, E. Albers, S. Minardi, G. Faga, P. Soffientini, E. Allievi, V. Cancila, A. Bachi, O. Fernandez-Capetillo, C. Tripodo, F. Ferrari, A. J. López-Contreras, V. Costanzo (2020) ATR expands embryonic stem cell fate potential in response to replication stress. eLife 9:e54756, doi:10.7554/eLife.54756

  • C. Bruckmann, E. Sebestyén (2017) Ten simple rules to initiate and run a postdoctoral association. PLOS Comput Biol, 13(8): e1005664, doi:10.1371/journal.pcbi.1005664

  • J. L. Trincado, E. Sebestyén, A. Pagès, E. Eyras (2016) The prognostic potential of alternative transcript isoforms across human tumors. Genome Med, 8(1): 85, doi:10.1186/s13073-016-0339-3

  • E. Sebestyén, B. Singh, B. Miñana, A. Pagès, F. Mateo, M. A. Pujana, J. Valcárcel, E. Eyras (2016) Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks. Genome Res, 26(6): 732 – 744, doi:10.1101/gr.199935.115

  • E. Sebestyén, M. Zawisza, E. Eyras (2015) Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer. Nucleic Acids Res, 43(3): 1345 – 1356, doi:10.1093/nar/gku1392

  • Gy. Gell, E. Sebestyén, E. Balázs (2015) Recombination analysis of Maize dwarf mosaic virus (MDMV) in the Sugarcane mosaic virus (SCMV) subgroup of potyviruses. Virus Genes, 50(1): 79 – 86, doi:10.1007/s11262-014-1142-0

  • M. P. Paronetto, I. Bernardis, E. Volpe, E. Bechara, E. Sebestyén, E. Eyras, J. Valcárcel (2014) Regulation of FAS Exon Definition and Apoptosis by the Ewing Sarcoma Protein. Cell Rep, 7(4): 1211 – 1226, doi:10.1016/j.celrep.2014.03.077

  • E. G. Bechara, E. Sebestyén, I. Bernardis, E. Eyras, J. Valcárcel (2013) RBM5, 6, and 10 Differentially Regulate NUMB Alternative Splicing to Control Cancer Cell Proliferation. Mol Cell, 52(5): 720 – 733, doi:10.1016/j.molcel.2013.11.010

  • I. Majláth, G. Szalai, V. Soós, E. Sebestyén, E. Balázs, R. Vanková, P. I. Dobrev, I. Tari, J. Tandori, T. Janda (2012) Effect of light on the gene expression and hormonal status of winter and spring wheat plants during cold hardening. Physiol Plantarum, 145(2): 296 – 314, doi:10.1111/j.1399-3054.2012.01579.x

  • V. Soós, E. Sebestyén, M. Posta, L. Kohout, M. E. Light, J. van Staden, E. Balázs (2012) Molecular aspects of the antagonistic interaction of smoke-derived butenolides on the germination process of Grand Rapids lettuce (Lactuca sativa) achenes. New Phytol, 196(4): 1060 – 1073, doi:10.1111/j.1469-8137.2012.04358.x

  • A. Juhász, Gy. Gell, E. Sebestyén, R. Haraszi, L. Tamás, E. Balázs (2012) Brachypodium distachyon as a model for defining the allergen potential of non-prolamin proteins. Funct Integr Genomics, 12(3): 439 – 446, doi:10.1007/s10142-012-0294-z

  • A. Juhász, Sz. Makai, E. Sebestyén, L. Tamás, E. Balázs (2011) Role of Conserved Non-Coding Regulatory Elements in LMW Glutenin Gene Expression. PLOS ONE, 6(12): e29501, doi:10.1371/journal.pone.0029501

  • K. Petrik, E. Sebestyén, Gy. Gell, E. Balázs (2010) Natural insertions within the N-terminal region of the coat protein of Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability. Virus Genes, 40(1): 135 – 139, doi:10.1007/s11262-009-0425-3

  • V. Soós, E. Sebestyén, A. Juhász, M. E. Light, L. Kohout, G. Szalai, J. Tandori, J. van Staden, E. Balázs (2010) Transcriptome analysis of germinating maize kernels exposed to smoke-water and the active compound KAR1. BMC Plant Biol, 10(1): 236, doi:10.1186/1471-2229-10-236

  • V. Soós, E. Sebestyén, A. Juhász, J. Pintér, M. E. Light, J. van Staden, E. Balázs (2009) Stress-related genes define essential steps in the response of maize seedlings to smoke-water. Funct Integr Genomics, 9(2): 231 – 242, doi:10.1007/s10142-008-0105-8

  • E. Sebestyén, T. Nagy, S. Suhai, E. Barta (2009) DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes. BMC Bioinf, 10(S6): S6, doi:10.1186/1471-2105-10-S6-S6

  • L. Kiss, E. Sebestyén, E. László, P. Salamon, E. Balázs, K. Salánki (2008) Nucleotide sequence analysis of peanut stunt virus Rp strain suggests the role of homologous recombination in cucumovirus evolution. Arch Virol, 153(7): 1373 – 1377, doi:10.1007/s00705-008-0120-z

  • E. Barta, E. Sebestyén, T. B. Pálfy, G. Tóth, Cs. P. Ortutay, L. Patthy (2005) DoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants. Nucleic Acids Res, 33(Database): D86 – D90, doi:10.1093/nar/gki097